Progress
Current Progress of Gene Sequencing
Sequencing Progress: Pilot Phase
Sequencing Progress: Phase 1
Assembled bat genomes available to the public
Bat1K is currently in phase 1, please see the members area for detailed progress status. To date, there are 6 reference quality genomes released by Bat1k, alongside 15 prior bat genomes that have been made available to the public, as listed below:
| wdt_ID | FAMILY | GENUS | SPECIES | COMMON NAME | DISTRIBUTION | PUBLICATIONS | GENOME SIZE |
|---|---|---|---|---|---|---|---|
| 1 | Hipposideridae | Hipposideros | armiger | Great Leaf-nosed Bat | N India, Nepal, Burma, S & SE China, Vietnam, Laos, Cambodia, Thailand, Malay Peninsula, Taiwan. | Dong et al., (2016) | ~2.18 Gb |
| 2 | Megadermatidae | Megaderma | lyra | Greater False Vampire Bat | Afghanistan to S China, Burma, Thailand, Cambodia, Laos, Vietnam; south to Sri Lanka & W Malaysia; Bangladesh. | Parker et al., (2013) | ~1.8 Gb |
| 3 | Miniopterinae | Miniopterus | natalensis | Natal Long-fingered Bat | Sudan & SW Arabia to South Africa. | Eckalbar et al., (2016) | ~1.8 Gb |
| 4 | Mormoopidae | Pteronotus | parnellii | Common Mustached Bat | Peru, Bolivia, Brazil, Guianas, & Venezuela to S Sonora & S Tamaulipas (Mexico); Cuba; Jamaica; Puerto Rico; Hispaniola; St. Vincent; Trinidad & Tobago; Margarita Isl (Venezuela); La Gonave Isl (Haiti). | Parker et al., (2013) | ~2 Gb |
| 5 | Pteropodidae | Eidolon | helvum | African Straw-coloured Fruit Bat | Mauritania, Senegal, & Gambia to Ethiopia to South Africa; SW Arabia & Oman; isls in the Gulf of Guinea & off E Africa. | Parker et al., (2013) | ~1.9 Gb |
| 6 | Pteropodidae | Pteropus | alecto | Black Flying Fox | Sulawesi, Saleyer Isl, Lombok, Bawean Isl, Kangean Isls, Sumba Isl, & Savu Isl (Indonesia); N & E Australia; S New Guinea. | Zhang et al., (2013) | ~2 Gb |
| 7 | Pteropodidae | Pteropus | vampyrus | Large Flying Fox | Vietnam, Burma, Malay Peninsula, Borneo, Philippines, Sumatra, Java, & Lesser Sunda Isls, adjacent small isls including Anak Krakatau. | http://www.ncbi.nlm.nih.gov/assembly/GCA_000151845.2#/st http://www.ncbi.nlm.nih.gov/genome/genomes/757? | ~2.1 Gb |
| 8 | Rhinolophidae | Rhinolophus | ferrumequinum | Greater Horseshoe Bat | Algeria, Morocco, & Tunisia; S Europe from Portugal to Greece & north to S England, the Netherl&s, S Germany, Austria, Czech Republic, Slovakia, & Bulgaria; Turkey, Cyprus, Georgia, & Azerbaijan; Urkrain, Crimea, & Caucacus regions; the Mediterranean coas | Parker et al., (2013) | ~1.95 Gb |
| 9 | Rhinolophidae | Rhinolophus | sinicus | Chinese Rufous Horseshoe Bat | S China, Nepal, N India, Vietnam. | Dong et al., (2016) | 2.07 Gb |
| 10 | Vespertilionidae | Eptesicus | fuscus | Big Brown Bat | S Canada to Colombia & N Brazil; Greater Antilles; Bahamas; Dominica & Barbados (Lesser Antilles); Alaska. | http://software.broadinstitute.org/allpaths-lg/blog/?p=606 | ~2 Gb |
| 11 | Vespertilionidae | Myotis | brandtii | Brandt's Myotis | Britain south to Italy, Greece, & Bulgaria; east to Kazakhstan & Mongolia, E Siberia including Sakhalin Isls, Kamchatka Peninsula & Kurile Isls; Ussuri region (Russia); Korea. | Seim et al., (2013) | ~2 Gb |
| 12 | Vespertilionidae | Myotis | davidii | David's Myotis | N. China | Zhang et al., (2013) | ~2 Gb |
| 13 | Vespertilionidae | Myotis | lucifugus | Little Brown Myotis | Alaska (USA) to Labrador & Newfoundland (Canada), south to S California, N Arizona, N New Mexico (USA). | https://www.broadinstitute.org/scientific-community/science/projects/mammals-models/brown-bat/little-brown-bat-genome-project MyoLuc 2.0, released July 2010 | ~2 Gb |
| 14 | Phyllostomidae | Desmodus | rotundas | Common Vampire Bat | Uruguay, N Argentina, Paraguay, Bolivia, & N Chile north to Sonora, Nuevo León & Tamaulipas (Mexico); Margarita Isl (Venezuela); Trinidad. | https://sid.erda.dk/sharelink/gBu4tuc7qz | ~2Gb |
| 15 | Pteropodidae | Eonycteris | spelaea | Cave nectar bat | Bangladesh, Brunei, Cambodia, Indonesia, Java, Kalimantan, Sumatra, Sulawesi, Laos, Malaysia, Myanmar, Philippines, Singapore, Thailand, Vietnam, China, India and Timor-Leste,Gomantong Caves, Sukau, Segama, and Madai in Sabah, Niah, Sungai Tinjar, | Wen et al., (2018) | 1.97 Gb |
| 16 | Rhinolophidae | Rhinolophus | ferrumequinum | Greater horseshoe bat | Algeria, Morocco, & Tunisia; S Europe from Portugal to Greece & north to S England, the Netherl&s, S Germany, Austria, Czech Republic, Slovakia, & Bulgaria; Turkey, Cyprus, Georgia, & Azerbaijan; Urkrain, Crimea, & Caucacus regions; the Mediterranean coas | https://www.biorxiv.org/content/10.1101/836874v1.full#F1 | ~2.08 Gb |
| 17 | Pteropodidae | Rousettus | aegyptiacus | Egyptian fruit bat | Senegal & Egypt south to South Africa; Cyprus, Turkey, Jordan, Lebanon, Israel, S Syria, Yemen, Saudi Arabia, S Iraq, S. Iran, Pakistan, NW India; isls in the Gulf of Guinea (São Tomé & Príncipe); adjacent small isls. | https://www.biorxiv.org/content/10.1101/836874v1.full#F1 | ~1.89 Gb |
| 18 | Phyllostomidae | Phyllostomus | discolor | Pale spear-nose bat | Oaxaca & Veracruz (Mexico) to Guianas, SE Brazil, Bolivia, Paraguay, N Argentina & Peru; Trinidad; Margarita Isl (Venezeula). | https://www.biorxiv.org/content/10.1101/836874v1.full#F1 | ~2.10 Gb |
| 19 | Vespertilionidae | Myotis | myotis | Greater mouse-eared bat | C & S Europe, east to Ukraine; S England; most Mediterranean isls; Azores (Portugal); Asia Minor; Lebanon, Syria, & Israel. | https://www.biorxiv.org/content/10.1101/836874v1.full#F1 | ~2.00 Gb |
| 20 | Vespertilionidae | Pipistrellus | kuhlii | Kuhl’s pipistrelle | C Europe, Near East through the Caucasus to Kazakhstan & Pakistan; SW Asia. | https://www.biorxiv.org/content/10.1101/836874v1.full#F1 | ~1.78 Gb |
| 21 | Molossidae | Molossus | molossus | Velvety free-tailed bat | Sinaloa & Coahuila (Mexico) to Peru, N Argentina, Paraguay, Uruguay, Brazil & Guianas; Greater & Lesser Antilles; Florida Keys (USA); Margarita Isl (Venezuela); Curaçao & Bonaire (Netherl&s Antilles); Trinidad & Tobago. | https://www.biorxiv.org/content/10.1101/836874v1.full#F1 | ~2.32 Gb |
| FAMILY | GENUS | SPECIES | COMMON NAME | DISTRIBUTION | PUBLICATIONS | GENOME SIZE |